Example of Journal of Proteome Research format
Recent searches

Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format
Sample paper formatted on SciSpace - SciSpace
This content is only for preview purposes. The original open access content can be found here.
Look Inside
Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format Example of Journal of Proteome Research format
Sample paper formatted on SciSpace - SciSpace
This content is only for preview purposes. The original open access content can be found here.
open access Open Access

Journal of Proteome Research — Template for authors

Categories Rank Trend in last 3 yrs
Chemistry (all) #61 of 398 down down by 28 ranks
Biochemistry #81 of 415 down down by 25 ranks
journal-quality-icon Journal quality:
High
calendar-icon Last 4 years overview: 1619 Published Papers | 11627 Citations
indexed-in-icon Indexed in: Scopus
last-updated-icon Last updated: 16/06/2020
Related journals
Insights
General info
Top papers
Popular templates
Get started guide
Why choose from SciSpace
FAQ

Related Journals

open access Open Access
recommended Recommended

Royal Society of Chemistry

Quality:  
High
CiteRatio: 11.2
SJR: 2.064
SNIP: 1.675
open access Open Access

Springer

Quality:  
High
CiteRatio: 4.4
SJR: 0.656
SNIP: 1.028
open access Open Access

Elsevier

Quality:  
High
CiteRatio: 6.1
SJR: 0.652
SNIP: 0.945
open access Open Access

Elsevier

Quality:  
High
CiteRatio: 5.6
SJR: 0.66
SNIP: 0.879

Journal Performance & Insights

Impact Factor

CiteRatio

Determines the importance of a journal by taking a measure of frequency with which the average article in a journal has been cited in a particular year.

A measure of average citations received per peer-reviewed paper published in the journal.

4.074

8% from 2018

Impact factor for Journal of Proteome Research from 2016 - 2019
Year Value
2019 4.074
2018 3.78
2017 3.95
2016 4.268
graph view Graph view
table view Table view

7.2

7% from 2019

CiteRatio for Journal of Proteome Research from 2016 - 2020
Year Value
2020 7.2
2019 6.7
2018 7.2
2017 8.0
2016 8.1
graph view Graph view
table view Table view

insights Insights

  • Impact factor of this journal has increased by 8% in last year.
  • This journal’s impact factor is in the top 10 percentile category.

insights Insights

  • CiteRatio of this journal has increased by 7% in last years.
  • This journal’s CiteRatio is in the top 10 percentile category.

SCImago Journal Rank (SJR)

Source Normalized Impact per Paper (SNIP)

Measures weighted citations received by the journal. Citation weighting depends on the categories and prestige of the citing journal.

Measures actual citations received relative to citations expected for the journal's category.

1.644

7% from 2019

SJR for Journal of Proteome Research from 2016 - 2020
Year Value
2020 1.644
2019 1.539
2018 1.518
2017 1.818
2016 1.76
graph view Graph view
table view Table view

1.016

1% from 2019

SNIP for Journal of Proteome Research from 2016 - 2020
Year Value
2020 1.016
2019 1.027
2018 0.957
2017 0.978
2016 1.023
graph view Graph view
table view Table view

insights Insights

  • SJR of this journal has increased by 7% in last years.
  • This journal’s SJR is in the top 10 percentile category.

insights Insights

  • SNIP of this journal has decreased by 1% in last years.
  • This journal’s SNIP is in the top 10 percentile category.

Journal of Proteome Research

Guideline source: View

Potential, possible, or probable predatory scholarly open-access publishers.

All company, product and service names used in this website are for identification purposes only. All product names, trademarks and registered trademarks are property of their respective owners.

Use of these names, trademarks and brands does not imply endorsement or affiliation. Disclaimer Notice

American Chemical Society

Journal of Proteome Research

The Journal of Proteome Research (JPR) publishes content encompassing all aspects of global protein analysis and function, emphasizing the synergy between physical and life sciences resulting in a multidisciplinary approach to the understanding of biological processes.... Read More

Chemistry

i
Last updated on
15 Jun 2020
i
ISSN
1535-3893
i
Impact Factor
High - 1.24
i
Open Access
Yes
i
Sherpa RoMEO Archiving Policy
White faq
i
Plagiarism Check
Available via Turnitin
i
Endnote Style
Download Available
i
Bibliography Name
ACS Custom Citation (achemso)
i
Citation Type
Numbered (Superscripted)
25
i
Bibliography Example
Beenakker, C. W. J. Specular Andreev Reflection in Graphene. Phys. Rev. Lett. 2006, 97, 067007.

Top papers written in this journal

open accessOpen access Journal Article DOI: 10.1021/PR101065J
Andromeda: a peptide search engine integrated into the MaxQuant environment

Abstract:

A key step in mass spectrometry (MS)-based proteomics is the identification of peptides in sequence databases by their fragmentation spectra. Here we describe Andromeda, a novel peptide search engine using a probabilistic scoring model. On proteome data, Andromeda performs as well as Mascot, a widely used commercial search en... A key step in mass spectrometry (MS)-based proteomics is the identification of peptides in sequence databases by their fragmentation spectra. Here we describe Andromeda, a novel peptide search engine using a probabilistic scoring model. On proteome data, Andromeda performs as well as Mascot, a widely used commercial search engine, as judged by sensitivity and specificity analysis based on target decoy searches. Furthermore, it can handle data with arbitrarily high fragment mass accuracy, is able to assign and score complex patterns of post-translational modifications, such as highly phosphorylated peptides, and accommodates extremely large databases. The algorithms of Andromeda are provided. Andromeda can function independently or as an integrated search engine of the widely used MaxQuant computational proteomics platform and both are freely available at www.maxquant.org. The combination enables analysis of large data sets in a simple analysis workflow on a desktop computer. For searching individual spect... read more read less
View PDF
4,689 Citations
Journal Article DOI: 10.1021/PR025556V
Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome.
Junmin Peng1, Joshua E. Elias1, Carson C. Thoreen1, Larry J. Licklider1, Steven P. Gygi1

Abstract:

Highly complex protein mixtures can be directly analyzed after proteolysis by liquid chromatography coupled with tandem mass spectrometry (LC−MS/MS). In this paper, we have utilized the combination of strong cation exchange (SCX) and reversed-phase (RP) chromatography to achieve two-dimensional separation prior to MS/MS. One ... Highly complex protein mixtures can be directly analyzed after proteolysis by liquid chromatography coupled with tandem mass spectrometry (LC−MS/MS). In this paper, we have utilized the combination of strong cation exchange (SCX) and reversed-phase (RP) chromatography to achieve two-dimensional separation prior to MS/MS. One milligram of whole yeast protein was proteolyzed and separated by SCX chromatography (2.1 mm i.d.) with fraction collection every minute during an 80-min elution. Eighty fractions were reduced in volume and then re-injected via an autosampler in an automated fashion using a vented-column (100 μm i.d.) approach for RP-LC−MS/MS analysis. More than 162 000 MS/MS spectra were collected with 26 815 matched to yeast peptides (7537 unique peptides). A total of 1504 yeast proteins were unambiguously identified in this single analysis. We present a comparison of this experiment with a previously published yeast proteome analysis by Yates and colleagues (Washburn, M. P.; Wolters, D.; Yates, J. ... read more read less

Topics:

Tandem mass spectrometry (54%)54% related to the paper, Elution (50%)50% related to the paper
1,654 Citations
Journal Article DOI: 10.1021/PR0504079
Proteomic analysis of the mode of antibacterial action of silver nanoparticles
Chun-Nam Lok1, Chi-Ming Ho1, Rong Chen1, Qing-Yu He1, Wing-Yiu Yu1, Hongzhe Sun1, Paul K.H. Tam1, Jen-Fu Chiu1, Chi-Ming Che1

Abstract:

Silver nanoparticles (nano-Ag) are potent and broad-spectrum antimicrobial agents. In this study, spherical nano-Ag (average diameter = 9.3 nm) particles were synthesized using a borohydride reduction method and the mode of their antibacterial action against E. coli was investigated by proteomic approaches (2-DE and MS identi... Silver nanoparticles (nano-Ag) are potent and broad-spectrum antimicrobial agents. In this study, spherical nano-Ag (average diameter = 9.3 nm) particles were synthesized using a borohydride reduction method and the mode of their antibacterial action against E. coli was investigated by proteomic approaches (2-DE and MS identification), conducted in parallel to analyses involving solutions of Ag+ ions. The proteomic data revealed that a short exposure of E. coli cells to antibacterial concentrations of nano-Ag resulted in an accumulation of envelope protein precursors, indicative of the dissipation of proton motive force. Consistent with these proteomic findings, nano-Ag were shown to destabilize the outer membrane, collapse the plasma membrane potential and deplete the levels of intracellular ATP. The mode of action of nano-Ag was also found to be similar to that of Ag+ ions (e.g., Dibrov, P. et al, Antimicrob. Agents Chemother. 2002, 46, 2668−2670); however, the effective concentrations of nano-Ag and Ag... read more read less

Topics:

Silver nanoparticle (56%)56% related to the paper
1,418 Citations
open accessOpen access Journal Article DOI: 10.1021/PR015504Q
DTASelect and Contrast: Tools for Assembling and Comparing Protein Identifications from Shotgun Proteomics
David L. Tabb1, McDonald Wh1, Yates Jr rd1

Abstract:

The components of complex peptide mixtures can be separated by liquid chromatography, fragmented by tandem mass spectrometry, and identified by the SEQUEST algorithm. Inferring a mixture's source proteins requires that the identified peptides be reassociated. This process becomes more challenging as the number of peptides inc... The components of complex peptide mixtures can be separated by liquid chromatography, fragmented by tandem mass spectrometry, and identified by the SEQUEST algorithm. Inferring a mixture's source proteins requires that the identified peptides be reassociated. This process becomes more challenging as the number of peptides increases. DTASelect, a new software package, assembles SEQUEST identifications and highlights the most significant matches. The accompanying Contrast tool compares DTASelect results from multiple experiments. The two programs improve the speed and precision of proteomic data analysis. read more read less

Topics:

Shotgun proteomics (59%)59% related to the paper
View PDF
1,383 Citations
open accessOpen access Journal Article DOI: 10.1021/PR0499491
Open mass spectrometry search algorithm.

Abstract:

Large numbers of MS/MS peptide spectra generated in proteomics experiments require efficient, sensitive and specific algorithms for peptide identification. In the Open Mass Spectrometry Search Algorithm (OMSSA), specificity is calculated by a classic probability score using an explicit model for matching experimental spectra ... Large numbers of MS/MS peptide spectra generated in proteomics experiments require efficient, sensitive and specific algorithms for peptide identification. In the Open Mass Spectrometry Search Algorithm (OMSSA), specificity is calculated by a classic probability score using an explicit model for matching experimental spectra to sequences. At default thresholds, OMSSA matches more spectra from a standard protein cocktail than a comparable algorithm. OMSSA is designed to be faster than published algorithms in searching large MS/MS datasets. Keywords: protein identification • algorithm • bioinformatics • mass spectrometry • proteomics • significance testing read more read less

Topics:

Peptide spectral library (58%)58% related to the paper, Mass spectrometry data format (54%)54% related to the paper, PeptideProphet (52%)52% related to the paper
1,304 Citations
Author Pic

SciSpace is a very innovative solution to the formatting problem and existing providers, such as Mendeley or Word did not really evolve in recent years.

- Andreas Frutiger, Researcher, ETH Zurich, Institute for Biomedical Engineering

Get MS-Word and LaTeX output to any Journal within seconds
1
Choose a template
Select a template from a library of 40,000+ templates
2
Import a MS-Word file or start fresh
It takes only few seconds to import
3
View and edit your final output
SciSpace will automatically format your output to meet journal guidelines
4
Submit directly or Download
Submit to journal directly or Download in PDF, MS Word or LaTeX

(Before submission check for plagiarism via Turnitin)

clock Less than 3 minutes

What to expect from SciSpace?

Speed and accuracy over MS Word

''

With SciSpace, you do not need a word template for Journal of Proteome Research.

It automatically formats your research paper to American Chemical Society formatting guidelines and citation style.

You can download a submission ready research paper in pdf, LaTeX and docx formats.

Time comparison

Time taken to format a paper and Compliance with guidelines

Plagiarism Reports via Turnitin

SciSpace has partnered with Turnitin, the leading provider of Plagiarism Check software.

Using this service, researchers can compare submissions against more than 170 million scholarly articles, a database of 70+ billion current and archived web pages. How Turnitin Integration works?

Turnitin Stats
Publisher Logos

Freedom from formatting guidelines

One editor, 100K journal formats – world's largest collection of journal templates

With such a huge verified library, what you need is already there.

publisher-logos

Easy support from all your favorite tools

Journal of Proteome Research format uses ACS Custom Citation (achemso) citation style.

Automatically format and order your citations and bibliography in a click.

SciSpace allows imports from all reference managers like Mendeley, Zotero, Endnote, Google Scholar etc.

Frequently asked questions

1. Can I write Journal of Proteome Research in LaTeX?

Absolutely not! Our tool has been designed to help you focus on writing. You can write your entire paper as per the Journal of Proteome Research guidelines and auto format it.

2. Do you follow the Journal of Proteome Research guidelines?

Yes, the template is compliant with the Journal of Proteome Research guidelines. Our experts at SciSpace ensure that. If there are any changes to the journal's guidelines, we'll change our algorithm accordingly.

3. Can I cite my article in multiple styles in Journal of Proteome Research?

Of course! We support all the top citation styles, such as APA style, MLA style, Vancouver style, Harvard style, and Chicago style. For example, when you write your paper and hit autoformat, our system will automatically update your article as per the Journal of Proteome Research citation style.

4. Can I use the Journal of Proteome Research templates for free?

Sign up for our free trial, and you'll be able to use all our features for seven days. You'll see how helpful they are and how inexpensive they are compared to other options, Especially for Journal of Proteome Research.

5. Can I use a manuscript in Journal of Proteome Research that I have written in MS Word?

Yes. You can choose the right template, copy-paste the contents from the word document, and click on auto-format. Once you're done, you'll have a publish-ready paper Journal of Proteome Research that you can download at the end.

6. How long does it usually take you to format my papers in Journal of Proteome Research?

It only takes a matter of seconds to edit your manuscript. Besides that, our intuitive editor saves you from writing and formatting it in Journal of Proteome Research.

7. Where can I find the template for the Journal of Proteome Research?

It is possible to find the Word template for any journal on Google. However, why use a template when you can write your entire manuscript on SciSpace , auto format it as per Journal of Proteome Research's guidelines and download the same in Word, PDF and LaTeX formats? Give us a try!.

8. Can I reformat my paper to fit the Journal of Proteome Research's guidelines?

Of course! You can do this using our intuitive editor. It's very easy. If you need help, our support team is always ready to assist you.

9. Journal of Proteome Research an online tool or is there a desktop version?

SciSpace's Journal of Proteome Research is currently available as an online tool. We're developing a desktop version, too. You can request (or upvote) any features that you think would be helpful for you and other researchers in the "feature request" section of your account once you've signed up with us.

10. I cannot find my template in your gallery. Can you create it for me like Journal of Proteome Research?

Sure. You can request any template and we'll have it setup within a few days. You can find the request box in Journal Gallery on the right side bar under the heading, "Couldn't find the format you were looking for like Journal of Proteome Research?”

11. What is the output that I would get after using Journal of Proteome Research?

After writing your paper autoformatting in Journal of Proteome Research, you can download it in multiple formats, viz., PDF, Docx, and LaTeX.

12. Is Journal of Proteome Research's impact factor high enough that I should try publishing my article there?

To be honest, the answer is no. The impact factor is one of the many elements that determine the quality of a journal. Few of these factors include review board, rejection rates, frequency of inclusion in indexes, and Eigenfactor. You need to assess all these factors before you make your final call.

13. What is Sherpa RoMEO Archiving Policy for Journal of Proteome Research?

SHERPA/RoMEO Database

We extracted this data from Sherpa Romeo to help researchers understand the access level of this journal in accordance with the Sherpa Romeo Archiving Policy for Journal of Proteome Research. The table below indicates the level of access a journal has as per Sherpa Romeo's archiving policy.

RoMEO Colour Archiving policy
Green Can archive pre-print and post-print or publisher's version/PDF
Blue Can archive post-print (ie final draft post-refereeing) or publisher's version/PDF
Yellow Can archive pre-print (ie pre-refereeing)
White Archiving not formally supported
FYI:
  1. Pre-prints as being the version of the paper before peer review and
  2. Post-prints as being the version of the paper after peer-review, with revisions having been made.

14. What are the most common citation types In Journal of Proteome Research?

The 5 most common citation types in order of usage for Journal of Proteome Research are:.

S. No. Citation Style Type
1. Author Year
2. Numbered
3. Numbered (Superscripted)
4. Author Year (Cited Pages)
5. Footnote

15. How do I submit my article to the Journal of Proteome Research?

It is possible to find the Word template for any journal on Google. However, why use a template when you can write your entire manuscript on SciSpace , auto format it as per Journal of Proteome Research's guidelines and download the same in Word, PDF and LaTeX formats? Give us a try!.

16. Can I download Journal of Proteome Research in Endnote format?

Yes, SciSpace provides this functionality. After signing up, you would need to import your existing references from Word or Bib file to SciSpace. Then SciSpace would allow you to download your references in Journal of Proteome Research Endnote style according to Elsevier guidelines.

Fast and reliable,
built for complaince.

Instant formatting to 100% publisher guidelines on - SciSpace.

Available only on desktops 🖥

No word template required

Typset automatically formats your research paper to Journal of Proteome Research formatting guidelines and citation style.

Verifed journal formats

One editor, 100K journal formats.
With the largest collection of verified journal formats, what you need is already there.

Trusted by academicians

I spent hours with MS word for reformatting. It was frustrating - plain and simple. With SciSpace, I can draft my manuscripts and once it is finished I can just submit. In case, I have to submit to another journal it is really just a button click instead of an afternoon of reformatting.

Andreas Frutiger
Researcher & Ex MS Word user
Use this template