Example of Applied and Environmental Microbiology format
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Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format
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Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format Example of Applied and Environmental Microbiology format
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open access Open Access
recommended Recommended

Applied and Environmental Microbiology — Template for authors

Categories Rank Trend in last 3 yrs
Ecology #34 of 400 down down by 17 ranks
Food Science #31 of 310 down down by 21 ranks
Applied Microbiology and Biotechnology #18 of 113 down down by 6 ranks
Biotechnology #53 of 282 down down by 23 ranks
journal-quality-icon Journal quality:
High
calendar-icon Last 4 years overview: 2310 Published Papers | 16496 Citations
indexed-in-icon Indexed in: Scopus
last-updated-icon Last updated: 19/06/2020
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Related Journals

open access Open Access

Springer

Quality:  
Good
CiteRatio: 3.2
SJR: 0.595
SNIP: 0.946
open access Open Access
recommended Recommended

Taylor and Francis

Quality:  
High
CiteRatio: 14.9
SJR: 1.702
SNIP: 2.222
open access Open Access
recommended Recommended

Springer

Quality:  
High
CiteRatio: 7.7
SJR: 1.053
SNIP: 1.746
open access Open Access
recommended Recommended

Oxford University Press

Quality:  
High
CiteRatio: 6.3
SJR: 1.377
SNIP: 1.049

Journal Performance & Insights

Impact Factor

CiteRatio

Determines the importance of a journal by taking a measure of frequency with which the average article in a journal has been cited in a particular year.

A measure of average citations received per peer-reviewed paper published in the journal.

4.016

1% from 2018

Impact factor for Applied and Environmental Microbiology from 2016 - 2019
Year Value
2019 4.016
2018 4.077
2017 3.633
2016 3.807
graph view Graph view
table view Table view

7.1

CiteRatio for Applied and Environmental Microbiology from 2016 - 2020
Year Value
2020 7.1
2019 7.1
2018 7.2
2017 7.5
2016 7.3
graph view Graph view
table view Table view

insights Insights

  • Impact factor of this journal has decreased by 1% in last year.
  • This journal’s impact factor is in the top 10 percentile category.

insights Insights

  • This journal’s CiteRatio is in the top 10 percentile category.

SCImago Journal Rank (SJR)

Source Normalized Impact per Paper (SNIP)

Measures weighted citations received by the journal. Citation weighting depends on the categories and prestige of the citing journal.

Measures actual citations received relative to citations expected for the journal's category.

1.552

3% from 2019

SJR for Applied and Environmental Microbiology from 2016 - 2020
Year Value
2020 1.552
2019 1.594
2018 1.663
2017 1.684
2016 1.705
graph view Graph view
table view Table view

1.292

2% from 2019

SNIP for Applied and Environmental Microbiology from 2016 - 2020
Year Value
2020 1.292
2019 1.271
2018 1.299
2017 1.254
2016 1.256
graph view Graph view
table view Table view

insights Insights

  • SJR of this journal has decreased by 3% in last years.
  • This journal’s SJR is in the top 10 percentile category.

insights Insights

  • SNIP of this journal has increased by 2% in last years.
  • This journal’s SNIP is in the top 10 percentile category.

Applied and Environmental Microbiology

Guideline source: View

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American Society for Microbiology

Applied and Environmental Microbiology

Applied and Environmental Microbiology (AEM) publishes study results that make significant contributions to applied microbial research, basic microbial ecology research, and genetic and molecular investigations of microbial topics of practical value. The journal sheds new ligh...... Read More

Food Science

Ecology

Applied Microbiology and Biotechnology

Agricultural and Biological Sciences

i
Last updated on
19 Jun 2020
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ISSN
0099-2240
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Impact Factor
High - 1.388
i
Open Access
No
i
Sherpa RoMEO Archiving Policy
Green faq
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Plagiarism Check
Available via Turnitin
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Endnote Style
Download Available
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Bibliography Name
unsrt asm custom citation
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Citation Type
Numbered
(25)
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Bibliography Example
Blonder, G. E., Tinkham, M., and Klapwijk, T. M. 1982. Transition from metallic to tunneling regimes in superconducting microconstrictions: Excess current, charge imbalance, and supercurrent conversion. Phys. Rev. B, 25(7):4515–4532.

Top papers written in this journal

open accessOpen access Journal Article DOI: 10.1128/AEM.01541-09
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Abstract:

mothur aims to be a comprehensive software package that allows users to use a single piece of software to analyze community sequence data. It builds upon previous tools to provide a flexible and powerful software package for analyzing sequencing data. As a case study, we used mothur to trim, screen, and align sequences; calcu... mothur aims to be a comprehensive software package that allows users to use a single piece of software to analyze community sequence data. It builds upon previous tools to provide a flexible and powerful software package for analyzing sequencing data. As a case study, we used mothur to trim, screen, and align sequences; calculate distances; assign sequences to operational taxonomic units; and describe the alpha and beta diversity of eight marine samples previously characterized by pyrosequencing of 16S rRNA gene fragments. This analysis of more than 222,000 sequences was completed in less than 2 h with a laptop computer. read more read less

Topics:

mothur (70%)70% related to the paper
View PDF
17,350 Citations
open accessOpen access Journal Article DOI: 10.1128/AEM.00062-07
Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
Qiong Wang, George M. Garrity1, James M. Tiedje1, James R. Cole

Abstract:

The Ribosomal Database Project (RDP) Classifier, a naive Bayesian classifier, can rapidly and accurately classify bacterial 16S rRNA sequences into the new higher-order taxonomy proposed in Bergey's Taxonomic Outline of the Prokaryotes (2nd ed., release 5.0, Springer-Verlag, New York, NY, 2004). It provides taxonomic assignme... The Ribosomal Database Project (RDP) Classifier, a naive Bayesian classifier, can rapidly and accurately classify bacterial 16S rRNA sequences into the new higher-order taxonomy proposed in Bergey's Taxonomic Outline of the Prokaryotes (2nd ed., release 5.0, Springer-Verlag, New York, NY, 2004). It provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. The majority of classifications (98%) were of high estimated confidence (≥95%) and high accuracy (98%). In addition to being tested with the corpus of 5,014 type strain sequences from Bergey's outline, the RDP Classifier was tested with a corpus of 23,095 rRNA sequences as assigned by the NCBI into their alternative higher-order taxonomy. The results from leave-one-out testing on both corpora show that the overall accuracies at all levels of confidence for near-full-length and 400-base segments were 89% or above down to the genus level, and the majority of the classification errors appear to be due to anomalies in the current taxonomies. For shorter rRNA segments, such as those that might be generated by pyrosequencing, the error rate varied greatly over the length of the 16S rRNA gene, with segments around the V2 and V4 variable regions giving the lowest error rates. The RDP Classifier is suitable both for the analysis of single rRNA sequences and for the analysis of libraries of thousands of sequences. Another related tool, RDP Library Compare, was developed to facilitate microbial-community comparison based on 16S rRNA gene sequence libraries. It combines the RDP Classifier with a statistical test to flag taxa differentially represented between samples. The RDP Classifier and RDP Library Compare are available online at http://rdp.cme.msu.edu/. read more read less
View PDF
16,048 Citations
open accessOpen access Journal Article DOI: 10.1128/AEM.59.3.695-700.1993
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
Gerard Muyzer1, E.C. de Waal1, And A G Uitterlinden1

Abstract:

We describe a new molecular approach to analyzing the genetic diversity of complex microbial populations. This technique is based on the separation of polymerase chain reaction-amplified fragments of genes coding for 16S rRNA, all the same length, by denaturing gradient gel electrophoresis (DGGE). DGGE analysis of different m... We describe a new molecular approach to analyzing the genetic diversity of complex microbial populations. This technique is based on the separation of polymerase chain reaction-amplified fragments of genes coding for 16S rRNA, all the same length, by denaturing gradient gel electrophoresis (DGGE). DGGE analysis of different microbial communities demonstrated the presence of up to 10 distinguishable bands in the separation pattern, which were most likely derived from as many different species constituting these populations, and thereby generated a DGGE profile of the populations. We showed that it is possible to identify constituents which represent only 1% of the total population. With an oligonucleotide probe specific for the V3 region of 16S rRNA of sulfate-reducing bacteria, particular DNA fragments from some of the microbial populations could be identified by hybridization analysis. Analysis of the genomic DNA from a bacterial biofilm grown under aerobic conditions suggests that sulfate-reducing bacteria, despite their anaerobicity, were present in this environment. The results we obtained demonstrate that this technique will contribute to our understanding of the genetic diversity of uncharacterized microbial populations. read more read less

Topics:

Temperature gradient gel electrophoresis (60%)60% related to the paper, Community Fingerprinting (60%)60% related to the paper, Gel electrophoresis (54%)54% related to the paper, Oligomer restriction (53%)53% related to the paper, Polymerase chain reaction (51%)51% related to the paper
11,380 Citations
open accessOpen access Journal Article DOI: 10.1128/AEM.03006-05
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Abstract:

A 16S rRNA gene database (http://greengenes.lbl.gov) addresses limitations of public repositories by providing chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies. It was found that there is incongruent taxonomic nomenclature among curators even at the phylum level. Putative... A 16S rRNA gene database (http://greengenes.lbl.gov) addresses limitations of public repositories by providing chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies. It was found that there is incongruent taxonomic nomenclature among curators even at the phylum level. Putative chimeras were identified in 3% of environmental sequences and in 0.2% of records derived from isolates. Environmental sequences were classified into 100 phylum-level lineages in the Archaea and Bacteria. read more read less

Topics:

Candidate division (50%)50% related to the paper
View PDF
9,593 Citations
open accessOpen access Journal Article DOI: 10.1128/AEM.71.12.8228-8235.2005
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
Catherine A. Lozupone1, Rob Knight1

Abstract:

We introduce here a new method for computing differences between microbial communities based on phylogenetic information. This method, UniFrac, measures the phylogenetic distance between sets of taxa in a phylogenetic tree as the fraction of the branch length of the tree that leads to descendants from either one environment o... We introduce here a new method for computing differences between microbial communities based on phylogenetic information. This method, UniFrac, measures the phylogenetic distance between sets of taxa in a phylogenetic tree as the fraction of the branch length of the tree that leads to descendants from either one environment or the other, but not both. UniFrac can be used to determine whether communities are significantly different, to compare many communities simultaneously using clustering and ordination techniques, and to measure the relative contributions of different factors, such as chemistry and geography, to similarities between samples. We demonstrate the utility of UniFrac by applying it to published 16S rRNA gene libraries from cultured isolates and environmental clones of bacteria in marine sediment, water, and ice. Our results reveal that (i) cultured isolates from ice, water, and sediment resemble each other and environmental clone sequences from sea ice, but not environmental clone sequences from sediment and water; (ii) the geographical location does not correlate strongly with bacterial community differences in ice and sediment from the Arctic and Antarctic; and (iii) bacterial communities differ between terrestrially impacted seawater (whether polar or temperate) and warm oligotrophic seawater, whereas those in individual seawater samples are not more similar to each other than to those in sediment or ice samples. These results illustrate that UniFrac provides a new way of characterizing microbial communities, using the wealth of environmental rRNA sequences, and allows quantitative insight into the factors that underlie the distribution of lineages among environments. read more read less

Topics:

UniFrac (67%)67% related to the paper, Phylogenetic tree (51%)51% related to the paper, Sea ice (50%)50% related to the paper
View PDF
6,679 Citations
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Time taken to format a paper and Compliance with guidelines

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Applied and Environmental Microbiology format uses unsrt asm custom citation citation style.

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Frequently asked questions

1. Can I write Applied and Environmental Microbiology in LaTeX?

Absolutely not! Our tool has been designed to help you focus on writing. You can write your entire paper as per the Applied and Environmental Microbiology guidelines and auto format it.

2. Do you follow the Applied and Environmental Microbiology guidelines?

Yes, the template is compliant with the Applied and Environmental Microbiology guidelines. Our experts at SciSpace ensure that. If there are any changes to the journal's guidelines, we'll change our algorithm accordingly.

3. Can I cite my article in multiple styles in Applied and Environmental Microbiology?

Of course! We support all the top citation styles, such as APA style, MLA style, Vancouver style, Harvard style, and Chicago style. For example, when you write your paper and hit autoformat, our system will automatically update your article as per the Applied and Environmental Microbiology citation style.

4. Can I use the Applied and Environmental Microbiology templates for free?

Sign up for our free trial, and you'll be able to use all our features for seven days. You'll see how helpful they are and how inexpensive they are compared to other options, Especially for Applied and Environmental Microbiology.

5. Can I use a manuscript in Applied and Environmental Microbiology that I have written in MS Word?

Yes. You can choose the right template, copy-paste the contents from the word document, and click on auto-format. Once you're done, you'll have a publish-ready paper Applied and Environmental Microbiology that you can download at the end.

6. How long does it usually take you to format my papers in Applied and Environmental Microbiology?

It only takes a matter of seconds to edit your manuscript. Besides that, our intuitive editor saves you from writing and formatting it in Applied and Environmental Microbiology.

7. Where can I find the template for the Applied and Environmental Microbiology?

It is possible to find the Word template for any journal on Google. However, why use a template when you can write your entire manuscript on SciSpace , auto format it as per Applied and Environmental Microbiology's guidelines and download the same in Word, PDF and LaTeX formats? Give us a try!.

8. Can I reformat my paper to fit the Applied and Environmental Microbiology's guidelines?

Of course! You can do this using our intuitive editor. It's very easy. If you need help, our support team is always ready to assist you.

9. Applied and Environmental Microbiology an online tool or is there a desktop version?

SciSpace's Applied and Environmental Microbiology is currently available as an online tool. We're developing a desktop version, too. You can request (or upvote) any features that you think would be helpful for you and other researchers in the "feature request" section of your account once you've signed up with us.

10. I cannot find my template in your gallery. Can you create it for me like Applied and Environmental Microbiology?

Sure. You can request any template and we'll have it setup within a few days. You can find the request box in Journal Gallery on the right side bar under the heading, "Couldn't find the format you were looking for like Applied and Environmental Microbiology?”

11. What is the output that I would get after using Applied and Environmental Microbiology?

After writing your paper autoformatting in Applied and Environmental Microbiology, you can download it in multiple formats, viz., PDF, Docx, and LaTeX.

12. Is Applied and Environmental Microbiology's impact factor high enough that I should try publishing my article there?

To be honest, the answer is no. The impact factor is one of the many elements that determine the quality of a journal. Few of these factors include review board, rejection rates, frequency of inclusion in indexes, and Eigenfactor. You need to assess all these factors before you make your final call.

13. What is Sherpa RoMEO Archiving Policy for Applied and Environmental Microbiology?

SHERPA/RoMEO Database

We extracted this data from Sherpa Romeo to help researchers understand the access level of this journal in accordance with the Sherpa Romeo Archiving Policy for Applied and Environmental Microbiology. The table below indicates the level of access a journal has as per Sherpa Romeo's archiving policy.

RoMEO Colour Archiving policy
Green Can archive pre-print and post-print or publisher's version/PDF
Blue Can archive post-print (ie final draft post-refereeing) or publisher's version/PDF
Yellow Can archive pre-print (ie pre-refereeing)
White Archiving not formally supported
FYI:
  1. Pre-prints as being the version of the paper before peer review and
  2. Post-prints as being the version of the paper after peer-review, with revisions having been made.

14. What are the most common citation types In Applied and Environmental Microbiology?

The 5 most common citation types in order of usage for Applied and Environmental Microbiology are:.

S. No. Citation Style Type
1. Author Year
2. Numbered
3. Numbered (Superscripted)
4. Author Year (Cited Pages)
5. Footnote

15. How do I submit my article to the Applied and Environmental Microbiology?

It is possible to find the Word template for any journal on Google. However, why use a template when you can write your entire manuscript on SciSpace , auto format it as per Applied and Environmental Microbiology's guidelines and download the same in Word, PDF and LaTeX formats? Give us a try!.

16. Can I download Applied and Environmental Microbiology in Endnote format?

Yes, SciSpace provides this functionality. After signing up, you would need to import your existing references from Word or Bib file to SciSpace. Then SciSpace would allow you to download your references in Applied and Environmental Microbiology Endnote style according to Elsevier guidelines.

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I spent hours with MS word for reformatting. It was frustrating - plain and simple. With SciSpace, I can draft my manuscripts and once it is finished I can just submit. In case, I have to submit to another journal it is really just a button click instead of an afternoon of reformatting.

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