Since 65 million years ago (Ma), Earth's climate has undergone a significant and complex evolution, the finer details of which are now coming to light through investigations of deep-sea sediment cores. This evolution includes gradual trends of warming and cooling driven by tectonic processes on time scales of 10(5) to 10(7) years, rhythmic or periodic cycles driven by orbital processes with 10(4)- to 10(6)-year cyclicity, and rare rapid aberrant shifts and extreme climate transients with durations of 10(3) to 10(5) years. Here, recent progress in defining the evolution of global climate over the Cenozoic Era is reviewed. We focus primarily on the periodic and anomalous components of variability over the early portion of this era, as constrained by the latest generation of deep-sea isotope records. We also consider how this improved perspective has led to the recognition of previously unforeseen mechanisms for altering climate.

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Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present

1.0. Introduction 4044 2.0. Biomass Chemistry and Growth Rates 4047 2.1. Lignocellulose and Starch-Based Plants 4047 2.2. Triglyceride-Producing Plants 4049 2.3. Algae 4050 2.4. Terpenes and Rubber-Producing Plants 4052 3.0. Biomass Gasification 4052 3.1. Gasification Chemistry 4052 3.2. Gasification Reactors 4054 3.3. Supercritical Gasification 4054 3.4. Solar Gasification 4055 3.5. Gas Conditioning 4055 4.0. Syn-Gas Utilization 4056 4.1. Hydrogen Production by Water−Gas Shift Reaction 4056

/pdf/synthesis-of-transportation-fuels-from-biomass-chemistry-3sckhzoqoz.pdf

Synthesis of transportation fuels from biomass: chemistry, catalysts, and engineering.

The influence of diet on the distribution of nitrogen isotopes in animals was investigated by analyzing animals grown in the laboratory on diets of constant nitrogen isotopic composition. 
The isotopic composition of the nitrogen in an animal reflects the nitrogen isotopic composition of its diet. The δ^(15)N values of the whole bodies of animals are usually more positive than those of their diets. Different individuals of a species raised on the same diet can have significantly different δ^(15)N values. The variability of the relationship between the δ^(15)N values of animals and their diets is greater for different species raised on the same diet than for the same species raised on different diets. Different tissues of mice are also enriched in ^(15)N relative to the diet, with the difference between the δ^(15)N values of a tissue and the diet depending on both the kind of tissue and the diet involved. The δ^(15)N values of collagen and chitin, biochemical components that are often preserved in fossil animal remains, are also related to the δ^(15)N value of the diet. 
The dependence of the δ^(15)N values of whole animals and their tissues and biochemical components on the δ^(15)N value of diet indicates that the isotopic composition of animal nitrogen can be used to obtain information about an animal's diet if its potential food sources had different δ^(15)N values. The nitrogen isotopic method of dietary analysis probably can be used to estimate the relative use of legumes vs non-legumes or of aquatic vs terrestrial organisms as food sources for extant and fossil animals. However, the method probably will not be applicable in those modern ecosystems in which the use of chemical fertilizers has influenced the distribution of nitrogen isotopes in food sources. 
The isotopic method of dietary analysis was used to reconstruct changes in the diet of the human population that occupied the Tehuacan Valley of Mexico over a 7000 yr span. Variations in the δ^(15)C and δ^(15)N values of bone collagen suggest that C_4 and/or CAM plants (presumably mostly corn) and legumes (presumably mostly beans) were introduced into the diet much earlier than suggested by conventional archaeological analysis.

Influence of Diet On the Distribtion of Nitrogen Isotopes in Animals

Biomass represents an abundant carbon-neutral renewable resource for the production of bioenergy and biomaterials, and its enhanced use would address several societal needs. Advances in genetics, biotechnology, process chemistry, and engineering are leading to a new manufacturing concept for converting renewable biomass to valuable fuels and products, generally referred to as the biorefinery. The integration of agroenergy crops and biorefinery manufacturing technologies offers the potential for the development of sustainable biopower and biomaterials that will lead to a new manufacturing paradigm.

http://science.sciencemag.org/content/sci/311/5760/484.full.pdf

The path forward for biofuels and biomaterials

This book is written as a reference on organic substances in natural waters and as a supplementary text for graduate students in water chemistry. The chapters address five topics: amount, origin, nature, geochemistry, and characterization of organic carbon. Of these topics, the main themes are the amount and nature of dissolved organic carbon in natural waters (mainly fresh water, although seawater is briefly discussed). It is hoped that the reader is familiar with organic chemistry, but it is not necessary. The first part of the book is a general overview of the amount and general nature of dissolved organic carbon. Over the past 10 years there has been an exponential increase in knowledge on organic substances in water, which is the result of money directed toward the research of organic compounds, of new methods of analysis (such as gas chromatography and mass spectrometry), and most importantly, the result of more people working in this field. Because of this exponential increase in knowledge, there is a need to pull together and summarize the data that has accumulated from many disciplines over the last decade.

Organic geochemistry of natural waters

http://deepblue.lib.umich.edu/bitstream/handle/2027.42/30617/0000257.pdf?sequence=1

Lacustrine organic geochemistry—an overview of indicators of organic matter sources and diagenesis in lake sediments

J. Anal. Appl. Pyrolysis

The organic-matter content of lake sediments provides information that is important to studies of lacustrine paleoenvironments, the history of climate change, and the effects of humans on local and regional ecosystems. Sediment organic matter yields a record of its sources from biota of the past in its elemental, isotopic, and molecular composition. The types and amounts of alterations that occur to the original contributions of organic matter during and after incorporation into sediments indicate much about the former physical and geochemical environments of lakes. Organic geochemical investigation of the sources and alterations of organic matter in lake sediments is consequently significant to a multitude of disciplines.

Organic Matter Accumulation Records in Lake Sediments

The distribution of linear alkylbenzenes (LABs) and linear alkylbenzenesulfonates (LASs) in river sediments, suspended river particles, domestic wastes, and waste effluents around the Tokyo city area was investigated. LABs as well as LASs with alkyl carbon chain lengths in the range from 10 to 14 were found in all environmental samples and LAS-type synthetic detergents examined. These results indicate that LABs are carried into aquatic environments as a result of the use of synthetic detergents around the Tokyo metropolitan area. Further results are (1) LABs in urban river sediments originate predominantly from untreated domestic wastes, final effluents contributing only a minor portion of the LABs in sediments, (2) the isomeric composition of the LABs changes systematically during biodegradation, and (3) the ratio of LAS to LAB decreases as follows: commercial synthetic detergents > suspended particles in domestic wastes > river sediments > Tokyo Bay sediments.

Linear alkylbenzenes in urban riverine environments in Tokyo: distribution, source, and behavior

A major extinction of intermediate-water (500–1000 m) benthic foraminiferal species coincided with a major decrease in δ13C (2.8‰) of terrestrial organic matter (n-C29 alkane) and δ34S (20‰) of whole rock sulfide in a continuous siltstone sequence in the Tawanui Section (46°S paleolatitude) along the Akitio River, southeastern North Island, New Zealand, in the middle part of the uppermost Paleocene nannofossil zone (CP8). The benthic extinction (25% of species) occurred over ∼3 kyr at ∼55.5 Ma. Increases in kaolinite/illite and kaolinite/smectite ratios and in terrestrial organic carbon percentages started ∼3 kyr before the major benthic extinctions, lasted over ∼40 kyr, and probably reflect warmer climate and increased rainfall. The productivity of planktonic foraminifera and calcareous nannoplankton decreased ∼3 kyr prior to the major extinctions and recovered at the time of benthic extinctions. These events that started ∼3 kyr before the extinction can be best explained by warming, increased rainfall, reduced salinity of surface waters, and increased influence of warm saline deep water (WSDW). Benthic foraminiferal oxygen indices indicate a strong decrease in dissolved oxygen levels within the intermediate water from low oxic (1.5–3.0 mL/L O2) to suboxic (0.3–1.5 mL/L O2) conditions coinciding with the benthic extinctions. Increases in total organic carbon (TOC) and in the hydrocarbon-generating potential of kerogen (measured as the hydrogen index (HI)) agree with the interpretation of decreased dissolved oxygen levels of the intermediate water. The lowest oxygen conditions lasted ∼40 kyr and coincided with a decrease in calcareous benthic foraminiferal productivity, highest TOC levels, and lowest δ13C of terrestrial organic carbon. Dominant formation of WSDW or sluggish intermediate-water circulation caused by warming and high rainfall in high-latitude areas most likely led to the ∼3-kyr time lag between events on land and in surface waters preceeding the extinction and the development of dysaerobia in the sea, coinciding with the major benthic extinction and decrease in δ13C and δ34S in New Zealand. Global warming of deep and intermediate waters may have caused decomposition of methane hydrate in sediments, resulting in a strongly decreased δ13C of marine carbonates, promoting dysaerobia in the ocean, and warming global climate by increased methane concentrations in the atmosphere. Upwelling of WSDW, occurring soon after it became dominant in high-latitude areas, is likely responsible for the recovery of normal salinity and the concomitant recovery of planktonic foraminifera and calcareous nannoplankton productivity in high-latitude surface waters. Minor benthic foraminiferal extinctions (9% of species) occurred ∼40 kyr after the major extinctions, lasted ≤ ∼6 kyr, and coincided with the initiation of environmental recovery.

Ryoshi Ishiwatari

Papers

Lacustrine organic geochemistry—an overview of indicators of organic matter sources and diagenesis in lake sediments

J. Anal. Appl. Pyrolysis

Organic Matter Accumulation Records in Lake Sediments

Linear alkylbenzenes in urban riverine environments in Tokyo: distribution, source, and behavior

Latest Paleocene benthic foraminiferal extinction and environmental changes at Tawanui, New Zealand