A
Amr Abouelliel
Researcher at Broad Institute
Publications - 2
Citations - 5675
Amr Abouelliel is an academic researcher from Broad Institute. The author has contributed to research in topics: Genome & Genomics. The author has an hindex of 2, co-authored 2 publications receiving 3642 citations.
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Journal ArticleDOI
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker,Thomas Abeel,Terrance Shea,Margaret Priest,Amr Abouelliel,Sharadha Sakthikumar,Christina A. Cuomo,Qiandong Zeng,Jennifer R. Wortman,Sarah Young,Ashlee M. Earl +10 more
TL;DR: Pilon is a fully automated, all-in-one tool for correcting draft assemblies and calling sequence variants of multiple sizes, including very large insertions and deletions, which is being used to improve the assemblies of thousands of new genomes and to identify variants from thousands of clinically relevant bacterial strains.
Journal ArticleDOI
Draft Genome Sequences of Six Enterohepatic Helicobacter Species Isolated from Humans and One from Rhesus Macaques
Zeli Shen,Alexander Sheh,Sarah Young,Amr Abouelliel,Doyle V. Ward,Ashlee M. Earl,James G. Fox +6 more
TL;DR: The genome sequences of seven enterohepatic Helicobacter species obtained from clinical patients and a nonhuman primate are presented and antibiotic resistance markers and Helicobacteria virulence factors are characterized.