A
Andrew C. Allan
Researcher at Plant & Food Research
Publications - 222
Citations - 19755
Andrew C. Allan is an academic researcher from Plant & Food Research. The author has contributed to research in topics: MYB & Gene. The author has an hindex of 58, co-authored 197 publications receiving 15745 citations. Previous affiliations of Andrew C. Allan include University of Auckland & University of Edinburgh.
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Journal ArticleDOI
The genome of the domesticated apple ( Malus × domestica Borkh.)
Riccardo Velasco,Andrey Zharkikh,Jason P. Affourtit,Amit Dhingra,Alessandro Cestaro,Ananth Kalyanaraman,Paolo Fontana,Satish Bhatnagar,Michela Troggio,Dmitry Pruss,Silvio Salvi,Massimo Pindo,Paolo Baldi,Sara Castelletti,Marina Cavaiuolo,G. Coppola,Fabrizio Costa,V. Cova,Antonio Dal Ri,Vadim V. Goremykin,M. Komjanc,Sara Longhi,P. Magnago,Giulia Malacarne,Mickael Malnoy,Diego Micheletti,Marco Moretto,Michele Perazzolli,Azeddine Si-Ammour,Silvia Vezzulli,E. Zini,Glenn Eldredge,Lisa M. Fitzgerald,N. Gutin,Jerry S. Lanchbury,Teresita Macalma,J.T. Mitchell,Julia Reid,Bryan Wardell,Chinnappa D. Kodira,Zhoutao Chen,Brian Desany,Faheem Niazi,Melinda Palmer,Tyson Koepke,Derick Jiwan,Scott Schaeffer,Vandhana Krishnan,Changjun Wu,Vu T. Chu,Stephen T. King,Jessica Vick,Quanzhou Tao,Amy Mraz,Aimee Stormo,Keith E. Stormo,Robert Bogden,Davide Ederle,Alessandra Stella,Alberto Vecchietti,Martin M. Kater,Simona Masiero,Pauline Lasserre,Yves Lespinasse,Andrew C. Allan,Vincent G. M. Bus,David Chagné,Ross N. Crowhurst,Andrew P. Gleave,Enrico Lavezzo,Jeffrey A. Fawcett,Jeffrey A. Fawcett,Sebastian Proost,Sebastian Proost,Pierre Rouzé,Pierre Rouzé,Lieven Sterck,Lieven Sterck,Stefano Toppo,Barbara Lazzari,Roger P. Hellens,Charles-Eric Durel,Alexander Gutin,Roger E. Bumgarner,Susan E. Gardiner,Mark H. Skolnick,Michael Egholm,Yves Van de Peer,Yves Van de Peer,Francesco Salamini,Roberto Viola +90 more
TL;DR: It is shown that a relatively recent (>50 million years ago) genome-wide duplication has resulted in the transition from nine ancestral chromosomes to 17 chromosomes in the Pyreae, which partly support the monophyly of the ancestral paleohexaploidy of eudicots.
Journal ArticleDOI
Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants
Roger P. Hellens,Andrew C. Allan,Ellen N. Friel,Karen Bolitho,Karryn Grafton,Matthew D. Templeton,Sakuntala Karunairetnam,Andrew P. Gleave,William A. Laing +8 more
TL;DR: In this article, a series of plasmid vectors for transient gene expression using Agrobacterium, infiltrated into Nicotiana benthamiana leaves, are described and compared to conventional binary vectors for stable transformation such as transformation selection genes.
Journal ArticleDOI
The genome of woodland strawberry ( Fragaria vesca )
Vladimir Shulaev,Daniel J. Sargent,Ross N. Crowhurst,Todd C. Mockler,Otto Folkerts,Arthur L. Delcher,Pankaj Jaiswal,Keithanne Mockaitis,Aaron Liston,Shrinivasrao P. Mane,Paul Burns,Thomas M. Davis,Janet P. Slovin,Nahla V. Bassil,Roger P. Hellens,Clive Evans,Tim Harkins,Chinnappa D. Kodira,Brian Desany,Oswald Crasta,Roderick V. Jensen,Andrew C. Allan,Andrew C. Allan,Todd P. Michael,João C. Setubal,Jean-Marc Celton,D. Jasper G. Rees,Kelly P. Williams,Sarah H. Holt,Juan Jairo Ruiz Rojas,Mithu Chatterjee,Bo Liu,Herman Silva,Lee A. Meisel,Avital Adato,Sergei A. Filichkin,Michela Troggio,Roberto Viola,Tia-Lynn Ashman,Hao Wang,Palitha Dharmawardhana,Justin Elser,Rajani Raja,Henry D. Priest,Douglas W. Bryant,Samuel E. Fox,Scott A. Givan,Larry J. Wilhelm,Sushma Naithani,Alan Christoffels,David Y. Salama,Jade Carter,Elena Lopez Girona,Anna Zdepski,Wenqin Wang,Randall A. Kerstetter,Wilfried Schwab,Schuyler S. Korban,Jahn Davik,Amparo Monfort,Beatrice Denoyes-Rothan,Pere Arús,Ron Mittler,Barry S. Flinn,Asaph Aharoni,Jeffrey L. Bennetzen,Steven L. Salzberg,Allan W. Dickerman,Riccardo Velasco,Mark Borodovsky,Richard E. Veilleux,Kevin M. Folta +71 more
TL;DR: New phylogenetic analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted, and macrosyntenic relationships between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes.
Journal ArticleDOI
Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10
Richard V. Espley,Roger P. Hellens,Joanna Putterill,David E. Stevenson,Sumathi Kutty-Amma,Andrew C. Allan +5 more
TL;DR: In this article, the authors reported the transcript levels of the anthocyanin biosynthetic genes in a red-fleshed apple compared with a white-fleshhed cultivar.
Journal Article
Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10
Richard V. Espley,Roger P. Hellens,Joanna Putterill,David E. Stevenson,Sumathi Kutty-Amma,Andrew C. Allan +5 more
TL;DR: The strong correlation between the expression of MdMYB10 and apple anthocyanin levels during fruit development suggests that this transcription factor is responsible for controlling anthocianin biosynthesis in apple fruit; in the red-fleshed cultivar and in the skin of other varieties, there is an induction of MdmyB10 expression concurrent with colour formation during development.