E
Ea Zankari
Researcher at Technical University of Denmark
Publications - 11
Citations - 8213
Ea Zankari is an academic researcher from Technical University of Denmark. The author has contributed to research in topics: Multilocus sequence typing & Plasmid. The author has an hindex of 10, co-authored 11 publications receiving 6089 citations.
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Journal ArticleDOI
Identification of acquired antimicrobial resistance genes
Ea Zankari,Henrik Hasman,Salvatore Cosentino,Martin Vestergaard,Simon Rasmussen,Ole Lund,Frank Møller Aarestrup,Mette Voldby Larsen +7 more
TL;DR: A web server providing a convenient way of identifying acquired antimicrobial resistance genes in completely sequenced isolates was created, and the method was evaluated on WGS chromosomes and plasmids of 30 isolates.
Journal ArticleDOI
In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
Alessandra Carattoli,Ea Zankari,Aurora García-Fernández,Mette Voldby Larsen,Ole Lund,Laura Villa,Frank Møller Aarestrup,Henrik Hasman +7 more
TL;DR: Two easy-to-use Web tools for in silico detection and characterization of whole-genome sequence (WGS) and whole-plasmid sequence data from members of the family Enterobacteriaceae are designed and developed.
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PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens.
Ea Zankari,Rosa Lundbye Allesøe,Katrine Grimstrup Joensen,Lina Cavaco,Ole Lund,Frank Møller Aarestrup +5 more
TL;DR: PointFinder proved, with high concordance between phenotypic and predicted antimicrobial susceptibility, to be a user-friendly web tool for detection of chromosomal point mutations associated with antimicrobial resistance.
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Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015
Henrik Hasman,Anette M. Hammerum,Frank Hansen,Rene S. Hendriksen,Bente Olesen,Yvonne Agersø,Ea Zankari,Pimlapas Leekitcharoenphon,Marc Stegger,Rolf Sommer Kaas,Lina Cavaco,Dennis S. Hansen,Frank Møller Aarestrup,Robert Skov +13 more
TL;DR: The plasmid-mediated colistin resistance gene, mcr-1, was detected in an Escherichia coli isolate from a Danish patient with bloodstream infection and in five E. coli isolates from imported chicken meat.
Journal ArticleDOI
Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing
Ea Zankari,Henrik Hasman,Rolf Sommer Kaas,Anne Mette Seyfarth,Yvonne Agersø,Ole Lund,Mette Voldby Larsen,Frank Møller Aarestrup +7 more
TL;DR: High concordance (99.74%) between phenotypic and predicted antimicrobial susceptibility was observed, and antimicrobial resistance testing based on WGS is an alternative to conventional Phenotypic methods.