J
José Sifuentes-Osornio
Researcher at SUNY Downstate Medical Center
Publications - 157
Citations - 7261
José Sifuentes-Osornio is an academic researcher from SUNY Downstate Medical Center. The author has contributed to research in topics: Tuberculosis & Medicine. The author has an hindex of 29, co-authored 129 publications receiving 4314 citations.
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Journal ArticleDOI
Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis
Christopher J L Murray,Kevin S Ikuta,Fablina Sharara,Lucien Swetschinski,Gisela Robles Aguilar,Authia Gray,Chieh Fei Han,Catherine Bisignano,Puja C Rao,Eve E. Wool,Sarah Charlotte Johnson,Annie J. Browne,Michael G. Chipeta,Frederick Fell,Sean Hackett,Georgina Haines-Woodhouse,Bahar H. Kashef Hamadani,Emmanuelle A. P. Kumaran,Barney McManigal,Sureeruk Achalapong,Ramesh Agarwal,Samuel Akech,Samuel B. Albertson,John H Amuasi,Jason R. Andrews,Aleskandr Aravkin,Elizabeth A. Ashley,François-Xavier Babin,Freddie Bailey,Stephen Baker,Buddha Basnyat,Adrie Bekker,Rose G Bender,James A. Berkley,Adhisivam Bethou,Julia Bielicki,Suppawat Boonkasidecha,James Bukosia,Cristina Gardony Carvalheiro,Carlos A Castañeda-Orjuela,Vilada Chansamouth,Suman Chaurasia,Sara Chiurchiù,Fazle Rabbi Chowdhury,Rafai Clotaire Donatien,Aislinn Cook,Ben S. Cooper,Tim R. Cressey,Elia Criollo-Mora,Matthew Cunningham,Saffiatou Darboe,Nicholas P. J. Day,Maia De Luca,Klara Dokova,Angela Dramowski,Susanna Dunachie,Thuy Duong Bich,Tim Eckmanns,Daniel Eibach,Amir Emami,Nicholas A. Feasey,Natasha Fisher-Pearson,Karen Forrest,Coralith Garcia,Denise O Garrett,Petra Gastmeier,Ababi Zergaw Giref,Rachel C Greer,Vikas Gupta,Sebastian Haller,Andrea Haselbeck,Simon I. Hay,M. Holm,Susan Hopkins,Yingfen Hsia,Kenneth Iregbu,Jan Jacobs,Daniel Jarovsky,Fatemeh Javanmardi,Adam Jenney,Meera Khorana,Suwimon Khusuwan,Niranjan Kissoon,Elsa Kobeissi,Tomislav Kostyanev,Fiorella Krapp,Ralf Krumkamp,Ajay Kumar,Hmwe H Kyu,Cherry Lim,Kruy Lim,Direk Limmathurotsakul,Michael J. Loftus,Miles Lunn,Jianing Ma,Anand Manoharan,Florian Marks,Jürgen May,Mayfong Mayxay,Neema Mturi,Tatiana Múnera-Huertas,Patrick Musicha,Lilian Musila,Marisa Márcia Mussi-Pinhata,Ravi Naidu,Tomoka Nakamura,Ruchi Nanavati,Sushma Nangia,Paul N. Newton,Chanpheaktra Ngoun,Amanda Novotney,Davis Nwakanma,Christina W. Obiero,Theresa J. Ochoa,Antonio Olivas-Martinez,Piero Olliaro,Edna Ooko,Edgar Ortiz-Brizuela,Pradthana Ounchanum,Gi Deok Pak,Jose Luis Paredes,Anton Y. Peleg,Carlo Perrone,Thong Phe,Koukeo Phommasone,Nishad Plakkal,Alfredo Ponce-de-León,Mathieu Raad,Tanusha Ramdin,Sayaphet Rattanavong,Amy Riddell,Tamalee Roberts,Julie V. Robotham,Anna Roca,Victor D. Rosenthal,Kristina E. Rudd,Neal Russell,Helio S. Sader,Weerawut Saengchan,Janice W. Schnall,John Anthony G Scott,Samroeng Seekaew,Mike Sharland,Madhusudhan Shivamallappa,José Sifuentes-Osornio,A. John Simpson,Nicolas Steenkeste,Andrew J. Stewardson,Temenuga Stoeva,Nidanuch Tasak,Areerat Thaiprakong,Guy E. Thwaites,Caroline Tigoi,Claudia Turner,Paul Turner,H. Rogier van Doorn,Sithembiso Velaphi,Avina Vongpradith,Manivanh Vongsouvath,Huong X. Vu,Timothy R. Walsh,Judd L. Walson,Seymour Waner,Tri Wangrangsimakul,Prapass Wannapinij,Teresa M. Wozniak,Tracey E M W Young Sharma,Kalvin C. Yu,Peng Zheng,Benn Sartorius,Alan D. Lopez,Andy Stergachis,Catrin E. Moore,Christiane Dolecek,Mohsen Naghavi +174 more
TL;DR: This study provides the first comprehensive assessment of the global burden of AMR, as well as an evaluation of the availability of data, and estimates aggregated to the global and regional level.
Journal ArticleDOI
Multidrug Resistant Pulmonary Tuberculosis Treatment Regimens and Patient Outcomes: An Individual Patient Data Meta-analysis of 9,153 Patients
Shama D. Ahuja,David Ashkin,Monika Avendano,Rita Banerjee,Melissa Bauer,Jamie N. Bayona,Mercedes C. Becerra,Mercedes C. Becerra,Andrea Benedetti,Marcos Burgos,Rosella Centis,Eward D. Chan,Chen Yuan Chiang,Helen Cox,Lia D'Ambrosio,Kathy DeRiemer,Nguyen Huy Dung,Donald A. Enarson,Dennis Falzon,Katherine Flanagan,Jennifer Flood,Maria de Lourdes García-García,Neel R. Gandhi,Reuben Granich,Maria G. Hollm-Delgado,Timothy H. Holtz,Michael D. Iseman,Leah G. Jarlsberg,Salmaan Keshavjee,Hye-Ryoun Kim,Won-Jung Koh,Joey Lancaster,Christophe Lange,Wiel C M de Lange,Vaira Leimane,Chi Chiu Leung,Jiehui Li,Dick Menzies,Giovanni Battista Migliori,Sergey P. Mishustin,Carole D. Mitnick,Masa Narita,Philly O'Riordan,Madhukar Pai,Domingo Palmero,Seung-kyu Park,Geoffrey Pasvol,José María Peña,Carlos Pérez-Guzmán,M. I. D. Quelapio,Alfredo Ponce-de-León,Vija Riekstina,Jérôme Robert,Sarah Royce,H. Simon Schaaf,Kwonjune J. Seung,Lena Shah,Tae Sun Shim,Sonya Shin,Yuji Shiraishi,José Sifuentes-Osornio,Giovanni Sotgiu,Matthew Strand,Payam Tabarsi,Thelma E. Tupasi,Robert van Altena,Martie van der Walt,Tjip S. van der Werf,Mario H. Vargas,Pirett Viiklepp,Janice Westenhouse,Wing Wai Yew,Jae-Joon Yim +72 more
TL;DR: Findings from a collaborative, individual patient-level meta-analysis of treatment outcomes among patients with multidrug-resistant tuberculosis are reported.
Journal ArticleDOI
Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set
Ingrid Filliol,Alifiya S. Motiwala,Magali Cavatore,Weihong Qi,Manzour Hernando Hazbón,Miriam Bobadilla-del Valle,Janet A. M. Fyfe,Lourdes García-García,Nalin Rastogi,Christophe Sola,TThierry Zozio,Marta Inírida Guerrero,Clara Inés León,Jonathan Crabtree,Samuel V. Angiuoli,Kathleen D. Eisenach,Riza Durmaz,Moses Joloba,Adrian Rendon,José Sifuentes-Osornio,Alfredo Ponce de León,M. Donald Cave,Robert D. Fleischmann,Thomas S. Whittam,David Alland +24 more
TL;DR: A global collection of Mycobacterium tuberculosis strains using 212 single nucleotide polymorphism (SNP) markers was analyzed to enable global collaborations for studies on evolution, strain differentiation, and biological differences of M. tuberculosis.
Journal ArticleDOI
Population Genetics Study of Isoniazid Resistance Mutations and Evolution of Multidrug-Resistant Mycobacterium tuberculosis
Manzour Hernando Hazbón,Michael Brimacombe,Miriam Bobadilla-del Valle,Magali Cavatore,Marta Inírida Guerrero,Mandira Varma-Basil,Helen Billman-Jacobe,Caroline J. Lavender,Janet A. M. Fyfe,Lourdes García-García,Clara Inés León,Mridula Bose,Fernando Chaves,Megan Murray,Kathleen D. Eisenach,José Sifuentes-Osornio,M. Donald Cave,Alfredo Ponce de León,David Alland +18 more
TL;DR: The results suggest that isoniazid resistance and the evolution of multidrug-resistant strains are complex dynamic processes that may be influenced by interactions between genes and drug-resistant phenotypes.
Journal ArticleDOI
Epidemiology of Candidemia in Latin America: A Laboratory-Based Survey
Marcio Nucci,Flavio Queiroz-Telles,Tito Alvarado-Matute,Iris Nora Tiraboschi,Jorge E. Cortes,Jeannete Zurita,Manuel Guzman-Blanco,María Elena Santolaya,Luis Thompson,José Sifuentes-Osornio,Juan Echevarria,Arnaldo Lopes Colombo +11 more
TL;DR: This first large epidemiologic study of candidemia in Latin America showed a high incidence ofCandida albicans, high percentage of children, typical species distribution, and low resistance rates.