Kurchatov Institute

About: Kurchatov Institute is a facility organization based out in Moscow, Russia. It is known for research contribution in the topics: Plasma & Neutron. The organization has 12493 authors who have published 18321 publications receiving 281837 citations. The organization is also known as: Laboratory No. 2 of the USSR Academy of Sciences & Kurchatov Institute.

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

Abstract: Epigenetic information is available from contemporary organisms, but is difficult to track back in evolutionary time. Here, we show that genome-wide epigenetic information can be gathered directly from next-generation sequence reads of DNA isolated from ancient remains. Using the genome sequence data generated from hair shafts of a 4000-yr-old Paleo-Eskimo belonging to the Saqqaq culture, we generate the first ancient nucleosome map coupled with a genome-wide survey of cytosine methylation levels. The validity of both nucleosome map and methylation levels were confirmed by the recovery of the expected signals at promoter regions, exon/intron boundaries, and CTCF sites. The top-scoring nucleosome calls revealed distinct DNA positioning biases, attesting to nucleotide-level accuracy. The ancient methylation levels exhibited high conservation over time, clustering closely with modern hair tissues. Using ancient methylation information, we estimated the age at death of the Saqqaq individual and illustrate how epigenetic information can be used to infer ancient gene expression. Similar epigenetic signatures were found in other fossil material, such as 110,000- to 130,000-yr-old bones, supporting the contention that ancient epigenomic information can be reconstructed from a deep past. Our findings lay the foundation for extracting epigenomic information from ancient samples, allowing shifts in epialleles to be tracked through evolutionary time, as well as providing an original window into modern epigenomics.

Measurement of Single Electrons and Implications for Charm Production in Au + Au Collisions at √sNN = 130 GeV

Abstract: Transverse momentum spectra of electrons from Au+Au collisions at roots(NN) = 130 GeV have been measured at midrapidity by the PHENIX experiment at the Relativistic Heavy Ion Collider. The spectra show an excess above the background from photon conversions and light hadron decays. The electron signal is consistent with that expected from semileptonic decays of charm. The yield of the electron signal dN(e)/dy for p(T) > 0.8 GeV/c is 0.025 +/- 0.004(stat) +/- 0.010( syst) in central collisions, and the corresponding charm cross section is 380 +/- 60(stat) +/- 200(syst ) mub per binary nucleon-nucleon collision.

Electron-phonon coupling and a polaron in the t-J model: from the weak to the strong coupling regime.

Abstract: We present numeric results for ground state and angle resolved photoemission spectra (ARPES) for a single hole in the t-J model coupled to optical phonons. The systematic-error-free diagrammatic Monte Carlo method is employed where the Feynman graphs for the Matsubara Green function in imaginary time are summed up completely with respect to phonon variables, while magnetic variables are subjected to the noncrossing approximation. We obtain that at electron-phonon coupling constants relevant for high T(c) cuprates the polaron undergoes a self-trapping crossover to the strong-coupling limit and theoretical ARPES demonstrate features observed in experiment: A broad peak in the bottom of the spectra has momentum dependence which coincides with that of a hole in the pure t-J model.