M
Masaki Miya
Researcher at American Museum of Natural History
Publications - 196
Citations - 14990
Masaki Miya is an academic researcher from American Museum of Natural History. The author has contributed to research in topics: Phylogenetic tree & Monophyly. The author has an hindex of 66, co-authored 186 publications receiving 12745 citations. Previous affiliations of Masaki Miya include Tokyo Institute of Technology & National Agriculture and Food Research Organization.
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Journal ArticleDOI
Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences.
Masaki Miya,Hirohiko Takeshima,Hiromitsu Endo,Naoya B. Ishiguro,Jun G. Inoue,Takahiko Mukai,Takashi P. Satoh,Motoomi Yamaguchi,Akira Kawaguchi,Kohji Mabuchi,Shigeru Shirai,Mutsumi Nishida +11 more
TL;DR: Many unexpected, but highly supported relationships were found within the Percomorpha, being highly promising for the next investigative step towards resolution of this remarkably diversified group of teleosts.
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MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species.
Masaki Miya,Yukuto Sato,Tsukasa Fukunaga,Tetsuya Sado,J. Y. Poulsen,Keiichi Sato,Toshifumi Minamoto,Satoshi Yamamoto,Hiroki Yamanaka,Hitoshi Araki,Michio Kondoh,Wataru Iwasaki +11 more
TL;DR: The metabarcoding approach presented here is non-invasive, more efficient, more cost-effective and more sensitive than the traditional survey methods and has the potential to serve as an alternative tool for biodiversity monitoring that revolutionizes natural resource management and ecological studies of fish communities on larger spatial and temporal scales.
Journal ArticleDOI
Phylogenetic classification of bony fishes.
Ricardo Betancur-R.,Ricardo Betancur-R.,Edward O. Wiley,Edward O. Wiley,Gloria Arratia,Arturo Acero,Nicolas Bailly,Masaki Miya,Guillaume Lecointre,Guillermo Ortí,Guillermo Ortí +10 more
TL;DR: This version of the phylogenetic classification of bony fishes is substantially improved, providing resolution for more taxa than previous versions, based on more densely sampled phylogenetic trees.
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MitoFish and MitoAnnotator: A Mitochondrial Genome Database of Fish with an Accurate and Automatic Annotation Pipeline
Wataru Iwasaki,Tsukasa Fukunaga,Ryota Isagozawa,Koichiro Yamada,Yasunobu Maeda,Takashi P. Satoh,Tetsuya Sado,Kohji Mabuchi,Hirohiko Takeshima,Masaki Miya,Mutsumi Nishida +10 more
TL;DR: MitoFish contains re-annotations of previously sequenced fish mitogenomes, enabling researchers to refer to them when they find annotations that are likely to be erroneous or while conducting comparative mitogenomic analyses.
Journal ArticleDOI
Mitogenomic Exploration of Higher Teleostean Phylogenies: A Case Study for Moderate-Scale Evolutionary Genomics with 38 Newly Determined Complete Mitochondrial DNA Sequences
TL;DR: It is concluded that purposeful higher-density taxonomic sampling, subsequent sequencing efforts, and phylogenetic analyses of their mitogenomes may be decisive in resolving persistent controversies over higher-level relationships of teleosts, the most diversified group of all vertebrates, comprising over 23,500 extant species.