S
Satoshi Yamamoto
Researcher at Kyoto University
Publications - 43
Citations - 3527
Satoshi Yamamoto is an academic researcher from Kyoto University. The author has contributed to research in topics: Environmental DNA & Population. The author has an hindex of 23, co-authored 43 publications receiving 2480 citations. Previous affiliations of Satoshi Yamamoto include Kobe University.
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Journal ArticleDOI
High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples
TL;DR: New ITS primers with improved coverage across diverse taxonomic groups of fungi compared to existing primers are designed to provide a basis for ecological studies on the diversity and community structures of fungi in the era of massive DNA sequencing.
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MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species.
Masaki Miya,Yukuto Sato,Tsukasa Fukunaga,Tetsuya Sado,J. Y. Poulsen,Keiichi Sato,Toshifumi Minamoto,Satoshi Yamamoto,Hiroki Yamanaka,Hitoshi Araki,Michio Kondoh,Wataru Iwasaki +11 more
TL;DR: The metabarcoding approach presented here is non-invasive, more efficient, more cost-effective and more sensitive than the traditional survey methods and has the potential to serve as an alternative tool for biodiversity monitoring that revolutionizes natural resource management and ecological studies of fish communities on larger spatial and temporal scales.
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Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea
Satoshi Yamamoto,Reiji Masuda,Yukuto Sato,Tetsuya Sado,Hitoshi Araki,Michio Kondoh,Toshifumi Minamoto,Masaki Miya +7 more
TL;DR: The ability of eDNA metabarcoding to reveal fish community structures in species-rich coastal waters by using high-performance fish-universal primers and systematic spatial water sampling at 47 stations covering ~11 km2 revealed the fish community structure at a species resolution.
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Environmental DNA as a 'snapshot' of fish distribution: A case study of Japanese jack mackerel in Maizuru Bay, Sea of Japan
Satoshi Yamamoto,Kenji Minami,Keiichi Fukaya,Kohji Takahashi,Hideki Sawada,Hiroaki Murakami,Satsuki Tsuji,Hiroki Hashizume,Shou Kubonaga,Tomoya Horiuchi,Masamichi Hongo,Jo Nishida,Yuta Okugawa,Ayaka Fujiwara,Miho Fukuda,Shunsuke Hidaka,Keita W. Suzuki,Masaki Miya,Hitoshi Araki,Hiroki Yamanaka,Atsushi Maruyama,Kazushi Miyashita,Reiji Masuda,Toshifumi Minamoto,Michio Kondoh +24 more
TL;DR: It is concluded that eDNA generally provides a ‘snapshot’ of fish distribution and biomass in a large area and a best-fit model included echo intensity obtained within 10–150 m from water sampling sites, indicating that the estimated eDNA concentration most likely reflects fish biomass within 150 m in the bay.
Journal ArticleDOI
Effect of water temperature and fish biomass on environmental DNA shedding, degradation, and size distribution.
Toshiaki Jo,Hiroaki Murakami,Satoshi Yamamoto,Satoshi Yamamoto,Reiji Masuda,Toshifumi Minamoto +5 more
TL;DR: It was shown that eDNA shedding, degradation, and size distribution varied depending on water temperature and fish biomass and that the small‐sized eDNA fractions were proportionally larger at higher temperatures, and these proportions varied among fish biomass.