M
Michael Zietz
Researcher at Columbia University
Publications - 14
Citations - 2312
Michael Zietz is an academic researcher from Columbia University. The author has contributed to research in topics: Autoencoder & Biology. The author has an hindex of 9, co-authored 11 publications receiving 1597 citations. Previous affiliations of Michael Zietz include University of Pennsylvania.
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Journal ArticleDOI
Opportunities and obstacles for deep learning in biology and medicine.
Travers Ching,Daniel Himmelstein,Brett K. Beaulieu-Jones,Alexandr A. Kalinin,Brian T. Do,Gregory P. Way,Enrico Ferrero,Paul-Michael Agapow,Michael Zietz,Michael M. Hoffman,Michael M. Hoffman,Wei Xie,Gail L. Rosen,Benjamin J. Lengerich,Johnny Israeli,Jack Lanchantin,Stephen Woloszynek,Anne E. Carpenter,Avanti Shrikumar,Jinbo Xu,Evan M. Cofer,Evan M. Cofer,Christopher A. Lavender,Srinivas C. Turaga,Amr Alexandari,Zhiyong Lu,David J. Harris,Dave DeCaprio,Yanjun Qi,Anshul Kundaje,Yifan Peng,Laura K. Wiley,Marwin H. S. Segler,Simina M. Boca,S. Joshua Swamidass,Austin Huang,Anthony Gitter,Anthony Gitter,Casey S. Greene +38 more
TL;DR: It is found that deep learning has yet to revolutionize biomedicine or definitively resolve any of the most pressing challenges in the field, but promising advances have been made on the prior state of the art.
Journal ArticleDOI
Associations between blood type and COVID-19 infection, intubation, and death.
TL;DR: Assessment of the association between ABO and Rh blood types and infection, intubation, and death in SARS-CoV-2 finds slightly increased infection prevalence among non-O types and estimates Rh-negative blood type to have a protective effect for all three outcomes.
Posted ContentDOI
Testing the association between blood type and COVID-19 infection, intubation, and death
TL;DR: A preliminary observational study of data currently being collected during the SARS-CoV-2 outbreak finds new evidence of associations between B, AB, and Rh blood types and COVID-19 and further evidence of recently-discovered associations between A and O blood groups and CO VID-19.
Journal ArticleDOI
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Daniel Butler,Christopher Mozsary,Cem Meydan,Jonathan Foox,Joel Rosiene,Alon Shaiber,David Danko,Ebrahim Afshinnekoo,Matthew MacKay,Fritz J. Sedlazeck,Nikolay A. Ivanov,Maria A. Sierra,Diana Pohle,Michael Zietz,Undina Gisladottir,Vijendra Ramlall,Evan Sholle,Edward J. Schenck,Craig Westover,Ciaran Hassan,Krista Ryon,Benjamin Young,Chandrima Bhattacharya,Dianna Ng,Andrea Granados,Yale A. Santos,Venice Servellita,Scot Federman,P. Ruggiero,Arkarachai Fungtammasan,Chen-Shan Chin,Nathaniel M. Pearson,Bradley W. Langhorst,Nathan A. Tanner,Youngmi Kim,Jason Reeves,Tyler Hether,Sarah Warren,Michael Bailey,Justyna Gawrys,Dmitry Meleshko,Dong Xu,Mara Couto-Rodriguez,Dorottya Nagy-Szakal,Joseph E. Barrows,Heather L. Wells,Niamh B. O’Hara,Jeffrey A. Rosenfeld,Ying Chen,Peter A D Steel,Amos J Shemesh,Jenny Xiang,Jean Thierry-Mieg,Danielle Thierry-Mieg,Angelika Iftner,Daniela Bezdan,Elizabeth Sanchez,Thomas R. Campion,John Sipley,Lin Cong,Arryn Craney,Priya Velu,Ari Melnick,Sagi Shapira,Iman Hajirasouliha,Alain C. Borczuk,Thomas Iftner,Mirella Salvatore,Massimo Loda,Lars F. Westblade,Melissa M. Cushing,Shixiu Wu,Shawn Levy,Charles Y. Chiu,Robert E. Schwartz,Nicholas P. Tatonetti,Hanna Rennert,Marcin Imielinski,Christopher E. Mason +78 more
TL;DR: A 30-minute colorimetric test for SARS-CoV-2 infection from naso/oropharyngeal swabs and a large-scale shotgun metatranscriptomics platform (total-RNA-seq) for host, viral, and microbial profiling was designed in this article.
Posted ContentDOI
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions
Daniel Butler,Christopher Mozsary,Cem Meydan,David Danko,Jonathan Foox,Joel Rosiene,Alon Shaiber,Ebrahim Afshinnekoo,Matthew MacKay,Fritz J. Sedlazeck,Nikolay A. Ivanov,Maria A. Sierra,Diana Pohle,Michael Zietz,Undina Gisladottir,Vijendra Ramlall,Craig Westover,Krista Ryon,Benjamin Young,Chandrima Bhattacharya,P. Ruggiero,Bradley W. Langhorst,Nathan A. Tanner,Justyna Gawrys,Dmitry Meleshko,Dong Xu,Peter A D Steel,Amos J Shemesh,Jenny Xiang,Jean Thierry-Mieg,Danielle Thierry-Mieg,Robert E. Schwartz,Angelika Iftner,Daniela Bezdan,John Sipley,Lin Cong,Arryn Craney,Priya Velu,Ari Melnick,Iman Hajirasouliha,Stacy M. Horner,Thomas Iftner,Mirella Salvatore,Massimo Loda,Lars F. Westblade,Melissa M. Cushing,Shawn Levy,Shixiu Wu,Nicholas P. Tatonetti,Marcin Imielinski,Hanna Rennert,Christopher E. Mason +51 more
TL;DR: A fast (30-minute) colorimetric test for SARS-CoV-2 infection from naso/oropharyngeal swabs, plus a large-scale shotgun metatranscriptomics platform (total-RNA-seq) for host, bacterial, and viral profiling, providing a broad molecular portrait of the COVID-19 NYC outbreak.