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Daphnia as an Emerging Epigenetic Model Organism

TLDR
Daphnia's parthenogenetic life cycle allows the study of epigenetic effects in the absence of confounding genetic differences, and more thorough studies on DNA methylation as well as investigation of histone modifications and RNAi in sex determination and predator-induced defenses will contribute to the understanding of epigenetics.
Abstract
Daphnia offer a variety of benefits for the study of epigenetics. Daphnia's parthenogenetic life cycle allows the study of epigenetic effects in the absence of confounding genetic differences. Sex determination and sexual reproduction are epigenetically determined as are several other well-studied alternate phenotypes that arise in response to environmental stressors. Additionally, there is a large body of ecological literature available, recently complemented by the genome sequence of one species and transgenic technology. DNA methylation has been shown to be altered in response to toxicants and heavy metals, although investigation of other epigenetic mechanisms is only beginning. More thorough studies on DNA methylation as well as investigation of histone modifications and RNAi in sex determination and predator-induced defenses using this ecologically and evolutionarily important organism will contribute to our understanding of epigenetics.

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Effect-Based Tools for Monitoring and Predicting the Ecotoxicological Effects of Chemicals in the Aquatic Environment

TL;DR: The use of biomarkers in Ecotoxicology including ecotoxicogenomics-based endpoints, which are becoming increasingly important for the detection of sublethal effects, are discussed.
Journal ArticleDOI

Epigenetics in an ecotoxicological context.

TL;DR: Two main potential implications of epigenetics in an ecotoxicological context are the possibility of transgenerationally inherited, chemical stress-induced epigenetic changes with associated phenotypes and epigenetically induced adaptation to stress upon long-term chemical exposure.
Journal ArticleDOI

Epigenetic memory of environmental organisms: a reflection of lifetime stressor exposures.

TL;DR: In this paper, the authors highlight epigenetic factors, specifically DNA methylation, as mechanisms of adaptation and response to environmental factors and which, if persistent, have the potential, retrospectively, to reflect previous stress exposures.
References
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Journal ArticleDOI

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

TL;DR: Advances in the understanding of the mechanism and role of DNA methylation in biological processes are reviewed, showing that epigenetic mechanisms seem to allow an organism to respond to the environment through changes in gene expression.
Journal ArticleDOI

Origins and Mechanisms of miRNAs and siRNAs

TL;DR: This work has revealed unexpected diversity in their biogenesis pathways and the regulatory mechanisms that they access, which has direct implications for fundamental biology as well as disease etiology and treatment.
Journal ArticleDOI

Chromosome territories, nuclear architecture and gene regulation in mammalian cells.

TL;DR: The emerging view is that chromosomes are compartmentalized into discrete territories and the location of a gene within a chromosome territory seems to influence its access to the machinery responsible for specific nuclear functions, such as transcription and splicing.

Nuclear architecture and gene regulation in mammalian cells

TL;DR: The emerging view is that chromosomes are compartmentalized into discrete territories, and the location of a gene within a chromosome territory seems to influence its access to the machinery responsible for specific nuclear functions, such as transcription and splicing.
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Trending Questions (1)
Is DEET has an toxic effect on the transcriptomics of daphnia?

The provided paper does not mention DEET or its effect on the transcriptomics of Daphnia.