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Journal ArticleDOI

Principal component analysis

TLDR
Principal component analysis (PCA) as discussed by the authors is a multivariate technique that analyzes a data table in which observations are described by several inter-correlated quantitative dependent variables, and its goal is to extract the important information from the table, to represent it as a set of new orthogonal variables called principal components, and display the pattern of similarity of the observations and of the variables as points in maps.
Abstract
Principal component analysis PCA is a multivariate technique that analyzes a data table in which observations are described by several inter-correlated quantitative dependent variables. Its goal is to extract the important information from the table, to represent it as a set of new orthogonal variables called principal components, and to display the pattern of similarity of the observations and of the variables as points in maps. The quality of the PCA model can be evaluated using cross-validation techniques such as the bootstrap and the jackknife. PCA can be generalized as correspondence analysis CA in order to handle qualitative variables and as multiple factor analysis MFA in order to handle heterogeneous sets of variables. Mathematically, PCA depends upon the eigen-decomposition of positive semi-definite matrices and upon the singular value decomposition SVD of rectangular matrices. Copyright © 2010 John Wiley & Sons, Inc.

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The structure and dynamics of multilayer networks

TL;DR: This work offers a comprehensive review on both structural and dynamical organization of graphs made of diverse relationships (layers) between its constituents, and cover several relevant issues, from a full redefinition of the basic structural measures, to understanding how the multilayer nature of the network affects processes and dynamics.
Journal ArticleDOI

Partial Least Squares (PLS) methods for neuroimaging: a tutorial and review.

TL;DR: For both PLS methods, statistical inferences are implemented using cross-validation techniques to identify significant patterns of voxel activation and are presented with small numerical examples and typical applications in neuroimaging.
Journal ArticleDOI

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)

Andrea Cossarizza, +462 more
TL;DR: These guidelines are a consensus work of a considerable number of members of the immunology and flow cytometry community providing the theory and key practical aspects offlow cytometry enabling immunologists to avoid the common errors that often undermine immunological data.
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Machine Learning for Internet of Things Data Analysis: A Survey

TL;DR: This article assesses the different machine learning methods that deal with the challenges in IoT data by considering smart cities as the main use case and presents a taxonomy of machine learning algorithms explaining how different techniques are applied to the data in order to extract higher level information.
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Prioritizing spatial accuracy in high-resolution fMRI data using multivariate feature weight mapping

TL;DR: This work proposes the combination of a non-parametric and permutation-based statistical framework with linear classifiers that is more spatially precise, revealing both informative anatomical structures as well as the direction by which voxels contribute to the classification.
References
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Book

An introduction to the bootstrap

TL;DR: This article presents bootstrap methods for estimation, using simple arguments, with Minitab macros for implementing these methods, as well as some examples of how these methods could be used for estimation purposes.
Journal ArticleDOI

Bagging predictors

Leo Breiman
TL;DR: Tests on real and simulated data sets using classification and regression trees and subset selection in linear regression show that bagging can give substantial gains in accuracy.
Reference EntryDOI

Principal Component Analysis

TL;DR: Principal component analysis (PCA) as discussed by the authors replaces the p original variables by a smaller number, q, of derived variables, the principal components, which are linear combinations of the original variables.
Journal ArticleDOI

The scree test for the number of factors

TL;DR: The Scree Test for the Number Of Factors this paper was first proposed in 1966 and has been used extensively in the field of behavioral analysis since then, e.g., in this paper.
Journal ArticleDOI

LIII. On lines and planes of closest fit to systems of points in space

TL;DR: This paper is concerned with the construction of planes of closest fit to systems of points in space and the relationships between these planes and the planes themselves.
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What is the mathematical equation for principal component analysis?

The mathematical equation for principal component analysis (PCA) involves the eigen-decomposition of positive semi-definite matrices and the singular value decomposition (SVD) of rectangular matrices.