S
Sutapa Dutta
Researcher at Indian Council of Agricultural Research
Publications - 21
Citations - 965
Sutapa Dutta is an academic researcher from Indian Council of Agricultural Research. The author has contributed to research in topics: Computer science & Gene mapping. The author has an hindex of 9, co-authored 14 publications receiving 762 citations. Previous affiliations of Sutapa Dutta include The Energy and Resources Institute & Karlsruhe Institute of Technology.
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Journal ArticleDOI
Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].
Sutapa Dutta,Sutapa Dutta,Giriraj Kumawat,Bikram Singh,Deepak K. Gupta,Surya Prakash Singh,Vivek Dogra,Kishor Gaikwad,Tilak Raj Sharma,R. S. Raje,Tapas K Bandhopadhya,Subhojit Datta,Mahendra Narain Singh,Fakrudin Bashasab,P. L. Kulwal,K. B. Wanjari,Rajeev K. Varshney,Douglas R. Cook,Nagendra K. Singh +18 more
TL;DR: A comprehensive set of validated genic simple sequence repeat (SSR) markers was developed as an important genomic resource for diversity analysis and genetic mapping in pigeonpea and was validated for expected allelic segregation in the reference mapping population.
Journal ArticleDOI
Genomic Selection in the Era of Next Generation Sequencing for Complex Traits in Plant Breeding.
Javaid Akhter Bhat,Sajad Ali,Romesh Kumar Salgotra,Zahoor Ahmad Mir,Sutapa Dutta,Vasudha Jadon,Anshika Tyagi,Muntazir Mushtaq,Neelu Jain,Pradeep Kumar Singh,G. P. Singh,Kumble Vinod Prabhu +11 more
TL;DR: The NGS-based genotyping have increased genomic-estimated breeding value prediction accuracies over other established marker platform in cereals and other crop species, and made the dream of GS true in crop breeding, but to harness the true benefits from GS, these marker technologies will be combined with high-throughput phenotyping for achieving the valuable genetic gain from complex traits.
Journal ArticleDOI
The first draft of the pigeonpea genome sequence
Nagendra K. Singh,Deepak K. Gupta,Pawan Kumar Jayaswal,Ajay Kumar Mahato,Sutapa Dutta,Surya Prakash Singh,Shefali Bhutani,Vivek Dogra,Bikram Singh,Giriraj Kumawat,Jitendra Kumar Pal,Awadhesh Pandit,Alok Singh,Hukum Rawal,Akhilesh Kumar,G. Rama Prashat,A. K. Khare,Rekha Yadav,Ranjit S. Raje,Mahendra Narain Singh,Subhojit Datta,B. Fakrudin,Keshav B. Wanjari,Rekha Kansal,Prasanta K. Dash,Pradeep K. Jain,Ramcharan Bhattacharya,Kishor Gaikwad,Trilochan Mohapatra,Ramamurthy Srinivasan,Tilak Raj Sharma +30 more
TL;DR: This is the first plant genome sequence completed entirely through a network of Indian institutions led by the Indian Council of Agricultural Research and provides a valuable resource for the pigeonpea variety improvement.
Journal ArticleDOI
Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.)
Rajeev K. Varshney,R. V. Penmetsa,Sutapa Dutta,P. L. Kulwal,Rachit K. Saxena,Subhojit Datta,Tilak Raj Sharma,Benjamin D. Rosen,Noelia Carrasquilla-Garcia,Andrew Farmer,Anuja Dubey,Kulbhushan Saxena,Jinliang Gao,B. Fakrudin,Meenakshi Singh,Bikram Singh,K. B. Wanjari,Mei Yuan,Rakesh K. Srivastava,Andrzej Kilian,Hari D. Upadhyaya,Nalini Mallikarjuna,Christopher D. Town,G. E. Bruening,Guohao He,Greg D. May,R. McCombie,Scott A. Jackson,Nirupma Singh,Douglas R. Cook +29 more
TL;DR: The collaborative efforts of several research groups under the umbrella of PGI are making significant progress in improving molecular tools in pigeonpea and should significantly benefit pigeon pea genetics and breeding.
Journal ArticleDOI
A Comprehensive Transcriptome Assembly of Pigeonpea (Cajanus cajan L.) using Sanger and Second-Generation Sequencing Platforms
Himabindu Kudapa,Arvind K. Bharti,Steven B. Cannon,Steven B. Cannon,Andrew Farmer,Benjamin Mulaosmanovic,Robin Kramer,Abhishek Bohra,Nathan T. Weeks,John A. Crow,Reetu Tuteja,Trushar Shah,Sutapa Dutta,Deepak K. Gupta,Alok Singh,Kishor Gaikwad,Tilak Raj Sharma,Gregory D. May,Nagendra K. Singh,Rajeev K. Varshney,Rajeev K. Varshney +20 more
TL;DR: In this paper, a comprehensive transcriptome assembly for pigeonpea has been developed by analyzing 128.9 million short Illumina GA IIx single end reads, 2.19 million single end FLX/454 reads, and 18 353 Sanger expressed sequenced tags from more than 16 genotypes.