T
Tomoya Baba
Researcher at Keio University
Publications - 41
Citations - 13548
Tomoya Baba is an academic researcher from Keio University. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 29, co-authored 40 publications receiving 12396 citations. Previous affiliations of Tomoya Baba include Nara Institute of Science and Technology & Kobe University.
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Journal ArticleDOI
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.
Tomoya Baba,Takeshi Ara,Miki Hasegawa,Yuki Takai,Yoshiko Okumura,Miki Baba,Kirill A. Datsenko,Masaru Tomita,Barry L. Wanner,Hirotada Mori,Hirotada Mori +10 more
TL;DR: These mutants—the ‘Keio collection’—provide a new resource not only for systematic analyses of unknown gene functions and gene regulatory networks but also for genome‐wide testing of mutational effects in a common strain background, E. coli K‐12 BW25113.
Journal ArticleDOI
Hd1, a Major Photoperiod Sensitivity Quantitative Trait Locus in Rice, Is Closely Related to the Arabidopsis Flowering Time Gene CONSTANS
Masahiro Yano,Yuichi Katayose,Motoyuki Ashikari,Utako Yamanouchi,Lisa Monna,Takuichi Fuse,Tomoya Baba,Kimiko Yamamoto,Yosuke Umehara,Yoshiaki Nagamura,Takuji Sasaki +10 more
TL;DR: It is suggested that Hd1 functions in the promotion of heading under short- day conditions and in inhibition under long-day conditions and is a homolog of CONSTANS in Arabidopsis.
Journal ArticleDOI
Multiple high-throughput analyses monitor the response of E. coli to perturbations.
Nobuyoshi Ishii,Kenji Nakahigashi,Tomoya Baba,Tomoya Baba,Martin Robert,Tomoyoshi Soga,Akio Kanai,Takashi Hirasawa,Miki Naba,Kenta Hirai,Aminul Hoque,Pei Yee Ho,Yuji Kakazu,Kaori Sugawara,Saori Igarashi,Satoshi Harada,Takeshi Masuda,Naoyuki Sugiyama,Takashi Togashi,Miki Hasegawa,Yuki Takai,Katsuyuki Yugi,Kazuharu Arakawa,Nayuta Iwata,Yoshihiro Toya,Yoichi Nakayama,Takaaki Nishioka,Takaaki Nishioka,Kazuyuki Shimizu,Kazuyuki Shimizu,Hirotada Mori,Hirotada Mori,Masaru Tomita +32 more
TL;DR: E. coli seems to use complementary strategies that result in a metabolic network robust against perturbations, and actively regulated enzyme levels to maintain a stable metabolic state in response to changes in growth rate.
Journal ArticleDOI
Genome Structure of the Legume, Lotus japonicus
Shusei Sato,Yasukazu Nakamura,Takakazu Kaneko,Erika Asamizu,Tomohiko Kato,Mitsuteru Nakao,Shigemi Sasamoto,Akiko Watanabe,Akiko Ono,Kumiko Kawashima,Tsunakazu Fujishiro,Midori Katoh,Mitsuyo Kohara,Yoshie Kishida,Chiharu Minami,Shinobu Nakayama,Naomi Nakazaki,Yoshimi Shimizu,Sayaka Shinpo,Chika Takahashi,Tsuyuko Wada,Manabu Yamada,Nobuko Ohmido,Makoto Hayashi,Kiichi Fukui,Tomoya Baba,Tomoko Nakamichi,Hirotada Mori,Satoshi Tabata +28 more
TL;DR: Structural features of the L. japonicus genome are reported, providing the first opportunity to look into the complex and unique genetic system of legumes.
Journal ArticleDOI
The genome sequence and structure of rice chromosome 1
Takuji Sasaki,Takashi Matsumoto,Kimiko Yamamoto,Katsumi Sakata,Tomoya Baba,Yuichi Katayose,Jianzhong Wu,Yoshihito Niimura,Zhukuan Cheng,Yoshiaki Nagamura,Baltazar A. Antonio,Hiroyuki Kanamori,Satomi Hosokawa,Masatoshi Masukawa,Koji Arikawa,Yoshino Chiden,Mika Hayashi,Masako Okamoto,Tsuyu Ando,Hiroyoshi Aoki,Kohei Arita,Masao Hamada,Chizuko Harada,Saori Hijishita,Mikiko Honda,Yoko Ichikawa,Atsuko Idonuma,Masumi Iijima,Michiko Ikeda,Maiko Ikeno,Sachie Ito,Tomoko Ito,Yuichi Ito,Yukiyo Ito,Aki Iwabuchi,Kozue Kamiya,Wataru Karasawa,Satoshi Katagiri,Ari Kikuta,Noriko Kobayashi,Izumi Kono,Kayo Machita,Tomoko Maehara,Hiroshi Mizuno,Tatsumi Mizubayashi,Yoshiyuki Mukai,Hideki Nagasaki,Marina Nakashima,Yuko Nakama,Yumi Nakamichi,Mari Nakamura,Nobukazu Namiki,Manami Negishi,Isamu Ohta,Nozomi Ono,Shoko Saji,Kumiko Sakai,Michie Shibata,Takanori Shimokawa,Ayahiko Shomura,Jianyu Song,Yuka Takazaki,Kimihiro Terasawa,Kumiko Tsuji,Kazunori Waki,Harumi Yamagata,Hiroko Yamane,Shoji Yoshiki,Rie Yoshihara,Kazuko Yukawa,Huisun Zhong,Hisakazu Iwama,Toshinori Endo,Hidetaka Ito,Jang Ho Hahn,Ho-Il Kim,Moo-Young Eun,Masahiro Yano,Jiming Jiang,Takashi Gojobori +79 more
TL;DR: The essentially complete sequence of chromosome 1, the longest chromosome in the rice genome, is reported and characteristics of the chromosome structure and the biological insight gained from the sequence are summarized.