K
Konrad Rokicki
Researcher at Howard Hughes Medical Institute
Publications - 12
Citations - 1698
Konrad Rokicki is an academic researcher from Howard Hughes Medical Institute. The author has contributed to research in topics: Biological neural network & Computer science. The author has an hindex of 4, co-authored 9 publications receiving 1276 citations.
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Journal ArticleDOI
A GAL4-Driver Line Resource for Drosophila Neurobiology
Arnim Jenett,Gerald M. Rubin,Teri-T B. Ngo,David Shepherd,Christine Murphy,Heather Dionne,Barret D. Pfeiffer,Amanda Cavallaro,Donald Hall,Jennifer Jeter,Nirmala Iyer,Dona Fetter,Joanna H. Hausenfluck,Hanchuan Peng,Eric T. Trautman,Robert Svirskas,Eugene W. Myers,Zbigniew R. Iwinski,Yoshinori Aso,Gina M. DePasquale,Adrianne Enos,Phuson Hulamm,S. Lam,Hsing-Hsi Li,Todd R. Laverty,Fuhui Long,Lei Qu,Sean D. Murphy,Konrad Rokicki,Todd Safford,Kshiti Shaw,Julie H. Simpson,Allison Sowell,Susana Tae,Yang Yu,Christopher T. Zugates +35 more
TL;DR: The utility of 7,000 transgenic lines of Drosophila melanogaster for identifying novel neuronal cell types, revealing brain asymmetry, and describing the nature and extent of neuronal shape stereotypy is illustrated.
Journal ArticleDOI
Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain
Johan Winnubst,Erhan Bas,Tiago Ferreira,Zhuhao Wu,Michael N. Economo,Patrick Edson,Ben J. Arthur,Christopher M. Bruns,Konrad Rokicki,David Schauder,Donald J. Olbris,Sean D. Murphy,David G. Ackerman,Cameron Arshadi,Perry Baldwin,Regina Blake,Ahmad Elsayed,Mashtura Hasan,Daniel Ramirez,Bruno Dos Santos,Monet Weldon,Amina Zafar,Joshua T. Dudman,Charles R. Gerfen,Adam W. Hantman,Wyatt Korff,Scott M. Sternson,Nelson Spruston,Karel Svoboda,Jayaram Chandrashekar +29 more
TL;DR: A robust and efficient platform for imaging and reconstructing complete neuronal morphologies, including axonal arbors that span substantial portions of the brain are presented and axonal shapes revealed previously unknown subtypes of projection neurons and suggest organizational principles of long-range connectivity.
Posted ContentDOI
An image resource of subdivided Drosophila GAL4-driver expression patterns for neuron-level searches
Geoffrey W. Meissner,Zachary Dorman,Aljoscha Nern,Kaitlyn Forster,Theresa Gibney,Jennifer Jeter,Lauren Johnson,Yisheng He,Kelley Lee,Brian Melton,Brianna Yarbrough,Jody Clements,Cristian Goina,Hideo Otsuna,Konrad Rokicki,Robert Svirskas,Yoshinori Aso,Gwyneth M Card,Barry J. Dickson,Erica Ehrhardt,Jens Goldammer,Masayoshi Ito,Wyatt Korff,Ryo Minegishi,Shigehiro Namiki,Gerald M. Rubin,Gabriella R Sterne,Tanya Wolff,Oz Malkesman +28 more
TL;DR: The NeuronBridge search tool is developed, which matches these light microscope neuronal images to neurons in the recently published FlyEM hemibrain and provides a resource and search tool that will significantly enhance both the efficiency and efficacy of split-GAL4 targeting of EM-identified neurons and further advance Drosophila neuroscience.
Posted ContentDOI
Reconstruction of 1,000 projection neurons reveals new cell types and organization of long-range connectivity in the mouse brain
Johan Winnubst,Erhan Bas,Erhan Bas,Tiago Ferreira,Zhuhao Wu,Michael N. Economo,Patrick Edson,Ben J. Arthur,Christopher M. Bruns,Christopher M. Bruns,Konrad Rokicki,David Schauder,Donald J. Olbris,Sean D. Murphy,David G. Ackerman,Cameron Arshadi,Perry Baldwin,Regina Blake,Ahmad Elsayed,Mashtura Hasan,Daniel Ramirez,Bruno Dos Santos,Monet Weldon,Amina Zafar,Joshua T. Dudmann,Charles R. Gerfen,Adam W. Hantman,Wyatt Korff,Scott M. Sternson,Nelson Spruston,Karel Svoboda,Jayaram Chandrashekar +31 more
TL;DR: A robust and efficient platform for imaging and reconstructing complete neuronal morphologies, including axonal arbors that span substantial portions of the brain are presented and previously unknown subtypes of projection neurons are revealed and organizational principles of long-range connectivity are suggested.
Posted ContentDOI
NeuronBridge: an intuitive web application for neuronal morphology search across large data sets
Jody Clements,Cristian Goina,Philip M. Hubbard,Takashi Kawase,Donald J. Olbris,Hideo Otsuna,Robert Svirskas,Konrad Rokicki +7 more
TL;DR: This work presents NeuronBridge, a web application for easily and rapidly finding putative morphological matches between large datasets of neurons imaged using different modalities, including its user-friendly GUI, data model, serverless cloud architecture, and massively parallel image search engine.